1.0 2011-09-21 00:25:04 UTC 2015-07-21 06:57:31 UTC FDB023126 Deoxyribose Deoxyribose is an aldopentose, a monosaccharide containing five carbon atoms, and including an aldehyde functional group. It is derived from the pentose sugar ribose by the replacement of the hydroxyl group at the 2 position with hydrogen, leading to the net loss of an oxygen atom, and has chemical formula C5H10O4. In deoxyribose, the carbon furthest from the attached carbon is stripped of the oxygen atom in what would be a hydroxyl group in ribose. The common base adenine (a purine derivative) coupled to deoxyribose is called deoxyadenosine. The 5-triphosphate derivative of adenosine, commonly called adenosine triphosphate (ATP) is an important energy transport molecule in cells. -- Wikipedia [HMDB] 2'-Deoxy-D-ribose C5H10O4 134.1305 134.057908808 (2S,4R,5S)-5-(hydroxymethyl)oxolane-2,4-diol 2-deoxyribose 533-67-5 OC[C@@H]1O[C@H](O)C[C@H]1O InChI=1S/C5H10O4/c6-2-4-3(7)1-5(8)9-4/h3-8H,1-2H2/t3-,4+,5+/m1/s1 PDWIQYODPROSQH-WISUUJSJSA-N belongs to the class of organic compounds known as pentoses. These are monosaccharides in which the carbohydrate moiety contains five carbon atoms. Pentoses Organic compounds Organic oxygen compounds Organooxygen compounds Carbohydrates and carbohydrate conjugates Aliphatic heteromonocyclic compounds Hemiacetals Hydrocarbon derivatives Oxacyclic compounds Primary alcohols Secondary alcohols Tetrahydrofurans Alcohol Aliphatic heteromonocyclic compound Hemiacetal Hydrocarbon derivative Organoheterocyclic compound Oxacycle Pentose monosaccharide Primary alcohol Secondary alcohol Tetrahydrofuran Solid logp -2.06 ALOGPS logs 0.89 ALOGPS solubility 1.05e+03 g/l ALOGPS logp -1.4 ChemAxon pka_strongest_acidic 12.36 ChemAxon pka_strongest_basic -3 ChemAxon iupac (2S,4R,5S)-5-(hydroxymethyl)oxolane-2,4-diol ChemAxon average_mass 134.1305 ChemAxon mono_mass 134.057908808 ChemAxon smiles OC[C@@H]1O[C@H](O)C[C@H]1O ChemAxon formula C5H10O4 ChemAxon inchi InChI=1S/C5H10O4/c6-2-4-3(7)1-5(8)9-4/h3-8H,1-2H2/t3-,4+,5+/m1/s1 ChemAxon inchikey PDWIQYODPROSQH-WISUUJSJSA-N ChemAxon polar_surface_area 69.92 ChemAxon refractivity 28.45 ChemAxon polarizability 12.67 ChemAxon rotatable_bond_count 1 ChemAxon acceptor_count 4 ChemAxon donor_count 3 ChemAxon physiological_charge 0 ChemAxon formal_charge 0 ChemAxon Specdb::MsMs 23720 Specdb::MsMs 23721 Specdb::MsMs 23722 Specdb::MsMs 30518 Specdb::MsMs 30519 Specdb::MsMs 30520 Specdb::MsMs 2471742 Specdb::MsMs 2471743 Specdb::MsMs 2471744 Specdb::MsMs 2494151 Specdb::MsMs 2494152 Specdb::MsMs 2494153 Specdb::CMs 14157 Specdb::CMs 38547 Specdb::CMs 130681 Specdb::CMs 138415 Specdb::MsIr 1898 Specdb::MsIr 1899 Specdb::MsIr 1900 Specdb::NmrOneD 135380 Specdb::NmrOneD 135381 Specdb::NmrOneD 135382 Specdb::NmrOneD 135383 Specdb::NmrOneD 135384 Specdb::NmrOneD 135385 Specdb::NmrOneD 135386 Specdb::NmrOneD 135387 Specdb::NmrOneD 135388 Specdb::NmrOneD 135389 Specdb::NmrOneD 135390 Specdb::NmrOneD 135391 Specdb::NmrOneD 135392 Specdb::NmrOneD 135393 Specdb::NmrOneD 135394 Specdb::NmrOneD 135395 Specdb::NmrOneD 135396 Specdb::NmrOneD 135397 Specdb::NmrOneD 135398 Specdb::NmrOneD 135399 HMDB03224 28816 #<Reference:0x000055ce31d09828> #<Reference:0x000055ce31d09670> #<Reference:0x000055ce31d09490> #<Reference:0x000055ce31d092d8> #<Reference:0x000055ce31d09120> #<Reference:0x000055ce31d08f68> Anatidae Type 1 specific Anatidae 8830 Beefalo Type 1 specific Bos taurus X Bison bison 297284 Bison Type 1 specific Bison bison 9901 Buffalo Type 1 specific Bubalus bubalis 89462 Cattle (Beef, Veal) Type 1 specific Bos taurus 9913 Chicken Type 1 specific Gallus gallus 9031 Columbidae (Dove, Pigeon) Type 1 specific Columbidae 8930 Deer Type 1 specific Cervidae 9850 Domestic goat Type 1 specific Capra aegagrus hircus 9925 Domestic pig Type 1 specific Sus scrofa domestica 9825 Elk Type 1 specific Cervus canadensis 1574408 Emu Type 1 specific Dromaius novaehollandiae 8790 European rabbit Type 1 specific Oryctolagus 9984 Greylag goose Type 1 specific Anser anser 8843 Guinea hen Type 1 specific Numida meleagris 8996 Horse Type 1 specific Equus caballus 9796 Mallard duck Type 1 specific Anas platyrhynchos 8839 Mountain hare Type 1 specific Lepus timidus 62621 Mule deer Type 1 specific Odocoileus 9871 Ostrich Type 1 specific Struthio camelus 8801 Pheasant Type 1 specific Phasianus colchicus 9054 Quail Type 1 specific Phasianidae 9005 Rabbit Type 1 specific Leporidae 9979 Rock ptarmigan Type 1 specific Lagopus muta 64668 Sheep (Mutton, Lamb) Type 1 specific Ovis aries 9940 Squab Type 1 specific Columba 8931 Turkey Type 1 specific Meleagris gallopavo 9103 Velvet duck Type 1 specific Melanitta fusca 371864 Wild boar Type 1 specific Sus scrofa 9823 Ribokinase Q9H477 RBKS