Record Information |
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Version | 1.0 |
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Creation date | 2010-04-08 22:09:58 UTC |
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Update date | 2019-11-26 03:06:06 UTC |
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Primary ID | FDB012064 |
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Secondary Accession Numbers | Not Available |
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Chemical Information |
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FooDB Name | 2'-Deoxyguanosine |
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Description | 2'-Deoxyguanosine belongs to the class of organic compounds known as purine 2'-deoxyribonucleosides. Purine 2'-deoxyribonucleosides are compounds consisting of a purine linked to a ribose which lacks a hydroxyl group at position 2. 2'-Deoxyguanosine is a moderately basic compound (based on its pKa). 2'-Deoxyguanosine has been detected, but not quantified in, a few different foods, such as green beans, pulses, and yellow wax beans. This could make 2'-deoxyguanosine a potential biomarker for the consumption of these foods. |
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CAS Number | 961-07-9 |
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Structure | |
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Synonyms | Synonym | Source |
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2-amino-9-(2-Deoxy-9-b-D-ribofuranosyl)-9H-purin-6-ol | Generator | 2-amino-9-(2-deoxy-9-beta-D-ribofuranosyl)-9H-purin-6-ol | biospider | 2-amino-9-(2-Deoxy-9-β-D-ribofuranosyl)-9H-purin-6-ol | Generator | 2-Deoxyguanosine | HMDB | 2'-deoxy-Guanosine | biospider | 2'-Deoxyguanosine | db_source | 9-(2-deoxy-b-D-erythro-pentofuranosyl)-Guanine | biospider | 9-(2-Deoxy-b-D-erythro-pentofuranosyl)guanine | biospider | 9-(2-Deoxy-beta-D-erythro-pentofuranosyl)-guanine | ChEBI | 9-(2-deoxy-beta-delta-erythro-pentofuranosyl)-Guanine | biospider | 9-(2-Deoxy-beta-delta-erythro-pentofuranosyl)guanine | biospider | 9-(2-Deoxy-β-D-erythro-pentofuranosyl)-guanine | Generator | 9H-Purin-6-ol, 2-amino-9-(2-deoxy-9-beta-D-ribofuranosyl)- | biospider | Deoxyguanosine | manual | Desoxyguanosine | HMDB | dG | ChEBI | Guanine deoxy nucleoside | biospider | Guanine deoxyriboside | db_source | Guanosine, 2'-deoxy- | biospider |
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Predicted Properties | |
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Chemical Formula | C10H13N5O4 |
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IUPAC name | 9-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-imino-3,9-dihydro-2H-purin-6-ol |
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InChI Identifier | InChI=1S/C10H13N5O4/c11-10-13-8-7(9(18)14-10)12-3-15(8)6-1-4(17)5(2-16)19-6/h3-6,16-17H,1-2H2,(H3,11,13,14,18) |
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InChI Key | YKBGVTZYEHREMT-UHFFFAOYSA-N |
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Isomeric SMILES | NC1=NC2=C(N=CN2C2CC(O)C(CO)O2)C(=O)N1 |
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Average Molecular Weight | 267.2413 |
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Monoisotopic Molecular Weight | 267.096753929 |
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Classification |
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Description | Belongs to the class of organic compounds known as purine 2'-deoxyribonucleosides. Purine 2'-deoxyribonucleosides are compounds consisting of a purine linked to a ribose which lacks a hydroxyl group at position 2. |
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Kingdom | Organic compounds |
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Super Class | Nucleosides, nucleotides, and analogues |
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Class | Purine nucleosides |
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Sub Class | Purine 2'-deoxyribonucleosides |
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Direct Parent | Purine 2'-deoxyribonucleosides |
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Alternative Parents | |
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Substituents | - Purine 2'-deoxyribonucleoside
- 6-oxopurine
- Hypoxanthine
- Purinone
- Imidazopyrimidine
- Purine
- Aminopyrimidine
- Pyrimidone
- N-substituted imidazole
- Pyrimidine
- Azole
- Imidazole
- Heteroaromatic compound
- Vinylogous amide
- Tetrahydrofuran
- Secondary alcohol
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Amine
- Primary amine
- Primary alcohol
- Organooxygen compound
- Organonitrogen compound
- Hydrocarbon derivative
- Organic oxide
- Alcohol
- Organopnictogen compound
- Organic nitrogen compound
- Organic oxygen compound
- Aromatic heteropolycyclic compound
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Molecular Framework | Aromatic heteropolycyclic compounds |
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External Descriptors | |
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Ontology |
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Ontology | No ontology term |
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Physico-Chemical Properties |
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Physico-Chemical Properties - Experimental | Property | Value | Reference |
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Physical state | Solid | |
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Physical Description | Not Available | |
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Mass Composition | C 44.94%; H 4.90%; N 26.21%; O 23.95% | DFC |
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Melting Point | Mp 300° (also said to be indefinite) | DFC |
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Boiling Point | Not Available | |
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Experimental Water Solubility | Not Available | |
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Experimental logP | -1.30 | BALZARINI,JM ET AL. (1989) |
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Experimental pKa | Not Available | |
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Isoelectric point | Not Available | |
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Charge | Not Available | |
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Optical Rotation | [a]24D -30.2 (H2O) | DFC |
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Spectroscopic UV Data | [base] lmax 262 (e 12000) (H2O) (pH 11) | DFC |
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Density | Not Available | |
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Refractive Index | Not Available | |
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Spectra |
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Spectra | Not Available |
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External Links |
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ChemSpider ID | 163230 |
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ChEMBL ID | CHEMBL68908 |
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KEGG Compound ID | C00330 |
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Pubchem Compound ID | 187790 |
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Pubchem Substance ID | Not Available |
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ChEBI ID | 17172 |
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Phenol-Explorer ID | Not Available |
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DrugBank ID | Not Available |
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HMDB ID | HMDB00085 |
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CRC / DFC (Dictionary of Food Compounds) ID | BVG62-X:HCX28-J |
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EAFUS ID | Not Available |
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Dr. Duke ID | Not Available |
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BIGG ID | 34637 |
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KNApSAcK ID | Not Available |
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HET ID | GNG |
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Food Biomarker Ontology | Not Available |
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VMH ID | Not Available |
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Flavornet ID | Not Available |
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GoodScent ID | Not Available |
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SuperScent ID | Not Available |
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Wikipedia ID | Deoxyguanosine |
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Phenol-Explorer Metabolite ID | Not Available |
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Duplicate IDS | Not Available |
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Old DFC IDS | Not Available |
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Associated Foods |
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Food | Content Range | Average | Reference |
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Food | | | Reference |
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Biological Effects and Interactions |
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Health Effects / Bioactivities | Not Available |
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Enzymes | Name | Gene Name | UniProt ID |
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Purine nucleoside phosphorylase | PNP | P00491 | Cytosolic 5'-nucleotidase 3 | NT5C3 | Q9H0P0 | Deoxyguanosine kinase, mitochondrial | DGUOK | Q16854 |
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Pathways | |
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Metabolism | Not Available |
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Biosynthesis | Not Available |
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Organoleptic Properties |
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Flavours | Not Available |
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Files |
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MSDS | show |
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References |
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Synthesis Reference | Not Available |
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General Reference | Not Available |
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Content Reference | |
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