1.0 2010-04-08 22:13:52 UTC 2019-11-26 03:16:29 UTC FDB018686 Syndesine An intramolecular crosslink of collagen. Syndesine is found in animal foods. Dehydrodihydroxylysinonorleucine N6-(5-Amino-5-carboxy-2-hydroxypentylidene)-5-hydroxy-L-lysine, 9CI C12H23N3O6 305.3275 305.158685483 2-amino-6-[(E)-(5-amino-5-carboxy-2-hydroxypentylidene)amino]-5-hydroxyhexanoic acid 2-amino-6-[(E)-(5-amino-5-carboxy-2-hydroxypentylidene)amino]-5-hydroxyhexanoic acid 35761-40-1 NC(CCC(O)C\N=C\C(O)CCC(N)C(O)=O)C(O)=O InChI=1S/C12H23N3O6/c13-9(11(18)19)3-1-7(16)5-15-6-8(17)2-4-10(14)12(20)21/h5,7-10,16-17H,1-4,6,13-14H2,(H,18,19)(H,20,21)/b15-5+ QWGIOMIEVFVREE-PJQLUOCWSA-N belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon). Alpha amino acids Organic compounds Organic acids and derivatives Carboxylic acids and derivatives Amino acids, peptides, and analogues Aliphatic acyclic compounds Amino acids Amino fatty acids Carbonyl compounds Carboxylic acids Dicarboxylic acids and derivatives Hydrocarbon derivatives Hydroxy fatty acids Medium-chain fatty acids Monoalkylamines Organic oxides Organopnictogen compounds Propargyl-type 1,3-dipolar organic compounds Secondary alcohols Shiff bases Alcohol Aldimine Aliphatic acyclic compound Alpha-amino acid Amine Amino acid Amino fatty acid Carbonyl group Carboxylic acid Dicarboxylic acid or derivatives Fatty acid Fatty acyl Hydrocarbon derivative Hydroxy fatty acid Imine Medium-chain fatty acid Organic 1,3-dipolar compound Organic nitrogen compound Organic oxide Organic oxygen compound Organonitrogen compound Organooxygen compound Organopnictogen compound Primary aliphatic amine Primary amine Propargyl-type 1,3-dipolar organic compound Secondary alcohol Shiff base logp -4.05 ALOGPS logs -2.12 ALOGPS solubility 2.29e+00 g/l ALOGPS logp -7 ChemAxon pka_strongest_acidic 1.58 ChemAxon pka_strongest_basic 9.52 ChemAxon iupac 2-amino-6-[(E)-(5-amino-5-carboxy-2-hydroxypentylidene)amino]-5-hydroxyhexanoic acid ChemAxon average_mass 305.3275 ChemAxon mono_mass 305.158685483 ChemAxon smiles NC(CCC(O)C\N=C\C(O)CCC(N)C(O)=O)C(O)=O ChemAxon formula C12H23N3O6 ChemAxon inchi InChI=1S/C12H23N3O6/c13-9(11(18)19)3-1-7(16)5-15-6-8(17)2-4-10(14)12(20)21/h5,7-10,16-17H,1-4,6,13-14H2,(H,18,19)(H,20,21)/b15-5+ ChemAxon inchikey QWGIOMIEVFVREE-PJQLUOCWSA-N ChemAxon polar_surface_area 179.46 ChemAxon refractivity 72.66 ChemAxon polarizability 31.01 ChemAxon rotatable_bond_count 11 ChemAxon acceptor_count 9 ChemAxon donor_count 6 ChemAxon physiological_charge 0 ChemAxon formal_charge 0 ChemAxon Specdb::CMs 18177 Specdb::CMs 46296 Specdb::CMs 157691 Specdb::MsMs 55179 Specdb::MsMs 55180 Specdb::MsMs 55181 Specdb::MsMs 170298 Specdb::MsMs 170299 Specdb::MsMs 170300 Specdb::MsMs 2286199 Specdb::MsMs 2286200 Specdb::MsMs 2286201 Specdb::MsMs 3083451 Specdb::MsMs 3083452 Specdb::MsMs 3083453 Specdb::NmrOneD 31402 Specdb::NmrOneD 31403 Specdb::NmrOneD 31404 Specdb::NmrOneD 31405 Specdb::NmrOneD 31406 Specdb::NmrOneD 31407 Specdb::NmrOneD 31408 Specdb::NmrOneD 31409 Specdb::NmrOneD 31410 Specdb::NmrOneD 31411 Specdb::NmrOneD 31412 Specdb::NmrOneD 31413 Specdb::NmrOneD 31414 Specdb::NmrOneD 31415 Specdb::NmrOneD 31416 Specdb::NmrOneD 31417 Specdb::NmrOneD 31418 Specdb::NmrOneD 31419 Specdb::NmrOneD 31420 Specdb::NmrOneD 31421 HMDB39161 #<Reference:0x000055ce327f9e90>