<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>1.0</version>
  <creation_date>2011-09-21 00:16:32 UTC</creation_date>
  <update_date>2015-07-21 06:57:16 UTC</update_date>
  <accession>FDB022592</accession>
  <name>Prostaglandin H2</name>
  <description>Prostaglandin H2 (PGH2) is the first intermediate in the biosynthesis of all prostaglandins. Prostaglandins are synthesized from arachidonic acid by the enzyme COX-1 and COX-2, which are also called PGH synthase 1 and 2. These enzymes generate a reactive intermediate PGH2 which has a reasonably long half-life (90-100 s) but is highly lipophilic. PGH2 is converted into the biologically active prostaglandins by prostaglandin isomerases, yielding PGE2, PGD2, and PGF2, or by thromboxane synthase to make TxA2 or by prostacyclin synthase to make PGI2. Most nonsteroidal anti-inflammatory drugs such as aspirin and indomethacin inhibit both PGH synthase 1 and 2. A key feature for eicosanoid transcellular biosynthesis is the export of PGH2 or LTA4 from the donor cell as well as the uptake of these reactive intermediates by the acceptor cell. Very little is known about either process despite the demonstrated importance of both events. 
In cells, PGH2 rearranges nonenzymatically to LGs even in the presence of enzymes that use PGH2 as a substrate. When platelets form Thromboxane A2 (TXA2) from endogenous arachidonic acid (AA), PGH2 reaches concentrations very similar to those of TXA2 and high enough to produce strong platelet activation. Therefore, platelet activation by TXA2 appears to go along with an activation by PGH2. The agonism of PGH2 is limited by the formation of inhibitory prostaglandins, especially PGD2 at higher concentrations. That is why thromboxane synthase inhibitors in PRP and at a physiological HSA concentration do not augment platelet activation. (PMID: 2798452, 15650407, 16968946)

Prostaglandins are eicosanoids. The eicosanoids consist of the prostaglandins (PGs), thromboxanes (TXs), leukotrienes (LTs) and lipoxins (LXs). The PGs and TXs are collectively identified as prostanoids. Prostaglandins were originally shown to be synthesized in the prostate gland, thromboxanes from platelets (thrombocytes) and leukotrienes from leukocytes, hence the derivation of their names. All mammalian cells except erythrocytes synthesize eicosanoids. These molecules are extremely potent, able to cause profound physiological effects at very dilute concentrations. All eicosanoids function locally at the site of synthesis, through receptor-mediated G-protein linked signaling pathways. [HMDB]</description>
  <synonyms>
    <synonym>(15S)Hydroxy-9alpha,11alpha-(epoxymethano)prosta-5,13-dienoate</synonym>
    <synonym>(15S)Hydroxy-9alpha,11alpha-(epoxymethano)prosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13E,15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13E,15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13E,15S)-9a,11a-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13E,15S)-9a,11a-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13e,15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13e,15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13e,15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13e,15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13E)-(15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13E)-(15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13e)-(15S)-9a,11a-Epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13e)-(15S)-9a,11a-Epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,13e)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate</synonym>
    <synonym>(5Z,13e)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoic acid</synonym>
    <synonym>(5Z,9a,11a,13E,15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dien-1-oate</synonym>
    <synonym>(5Z,9a,11a,13E,15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dien-1-oic acid</synonym>
    <synonym>(5Z,9alpha,11alpha,13E,15S)-9,11-epidioxy-15-hydroxy-Prosta-5,13-dien-1-oate</synonym>
    <synonym>(5Z,9alpha,11alpha,13E,15S)-9,11-epidioxy-15-hydroxy-Prosta-5,13-dien-1-oic acid</synonym>
    <synonym>(5Z,9alpha,11alpha,13e,15S)-9,11-Epidioxy-15-hydroxyprosta-5,13-dien-1-Oate</synonym>
    <synonym>(5Z,9alpha,11alpha,13e,15S)-9,11-Epidioxy-15-hydroxyprosta-5,13-dien-1-Oic acid</synonym>
    <synonym>(5Z,9α,11α,13e,15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dien-1-Oate</synonym>
    <synonym>(5Z,9α,11α,13e,15S)-9,11-epidioxy-15-hydroxyprosta-5,13-dien-1-Oic acid</synonym>
    <synonym>(5Z)-7-{(1R,4S,5R,6R)-6-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-2,3-dioxabicyclo[2.2.1]hept-5-yl}hept-5-enoate</synonym>
    <synonym>(5Z)-7-{(1R,4S,5R,6R)-6-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-2,3-dioxabicyclo[2.2.1]hept-5-yl}hept-5-enoic acid</synonym>
    <synonym>15-Hydroxy-9alpha,11alpha-peroxidoprosta-5,13-dienoate</synonym>
    <synonym>15-Hydroxy-9alpha,11alpha-peroxidoprosta-5,13-dienoic acid</synonym>
    <synonym>9,11-Epoxymethano-pgh2</synonym>
    <synonym>9S,11R-epidioxy-15S-hydroxy-5Z,13E-prostadienoate</synonym>
    <synonym>9S,11R-epidioxy-15S-hydroxy-5Z,13E-prostadienoic acid</synonym>
    <synonym>Endoperoxide H2</synonym>
    <synonym>PGH2</synonym>
    <synonym>Prostaglandin R2</synonym>
    <synonym>Prostaglandin-H2</synonym>
  </synonyms>
  <chemical_formula>C20H32O5</chemical_formula>
  <average_molecular_weight>352.4651</average_molecular_weight>
  <monisotopic_moleculate_weight>352.224974134</monisotopic_moleculate_weight>
  <iupac_name>7-[(1R,4S,5R,6R)-6-[(3S)-3-hydroxyoct-1-en-1-yl]-2,3-dioxabicyclo[2.2.1]heptan-5-yl]hept-5-enoic acid</iupac_name>
  <traditional_iupac>7-[(1R,4S,5R,6R)-6-[(3S)-3-hydroxyoct-1-en-1-yl]-2,3-dioxabicyclo[2.2.1]heptan-5-yl]hept-5-enoic acid</traditional_iupac>
  <cas_registry_number>42935-17-1</cas_registry_number>
  <smiles>[H]C(=C[C@@]1([H])[C@@]2([H])C[C@]([H])(OO2)[C@]1([H])CC=CCCCC(O)=O)[C@@]([H])(O)CCCCC</smiles>
  <inchi>InChI=1S/C20H32O5/c1-2-3-6-9-15(21)12-13-17-16(18-14-19(17)25-24-18)10-7-4-5-8-11-20(22)23/h4,7,12-13,15-19,21H,2-3,5-6,8-11,14H2,1H3,(H,22,23)/t15-,16+,17+,18-,19+/m0/s1</inchi>
  <inchikey>YIBNHAJFJUQSRA-BRIYLRKRSA-N</inchikey>
  <taxonomy>
    <description> belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid.</description>
    <direct_parent>Prostaglandins and related compounds</direct_parent>
    <kingdom>Organic compounds</kingdom>
    <super_class>Lipids and lipid-like molecules</super_class>
    <class>Fatty Acyls</class>
    <sub_class>Eicosanoids</sub_class>
    <molecular_framework>Aliphatic heteropolycyclic compounds</molecular_framework>
    <alternative_parents>
      <alternative_parent>1,2-dioxanes</alternative_parent>
      <alternative_parent>1,2-dioxolanes</alternative_parent>
      <alternative_parent>Carbonyl compounds</alternative_parent>
      <alternative_parent>Carboxylic acids</alternative_parent>
      <alternative_parent>Dialkyl peroxides</alternative_parent>
      <alternative_parent>Heterocyclic fatty acids</alternative_parent>
      <alternative_parent>Hydrocarbon derivatives</alternative_parent>
      <alternative_parent>Hydroxy fatty acids</alternative_parent>
      <alternative_parent>Long-chain fatty acids</alternative_parent>
      <alternative_parent>Monocarboxylic acids and derivatives</alternative_parent>
      <alternative_parent>Oxacyclic compounds</alternative_parent>
      <alternative_parent>Secondary alcohols</alternative_parent>
      <alternative_parent>Unsaturated fatty acids</alternative_parent>
    </alternative_parents>
    <substituents>
      <substituent>Alcohol</substituent>
      <substituent>Aliphatic heteropolycyclic compound</substituent>
      <substituent>Carbonyl group</substituent>
      <substituent>Carboxylic acid</substituent>
      <substituent>Carboxylic acid derivative</substituent>
      <substituent>Dialkyl peroxide</substituent>
      <substituent>Fatty acid</substituent>
      <substituent>Heterocyclic fatty acid</substituent>
      <substituent>Hydrocarbon derivative</substituent>
      <substituent>Hydroxy fatty acid</substituent>
      <substituent>Long-chain fatty acid</substituent>
      <substituent>Monocarboxylic acid or derivatives</substituent>
      <substituent>Organic oxide</substituent>
      <substituent>Organic oxygen compound</substituent>
      <substituent>Organoheterocyclic compound</substituent>
      <substituent>Organooxygen compound</substituent>
      <substituent>Ortho-dioxane</substituent>
      <substituent>Ortho-dioxolane</substituent>
      <substituent>Oxacycle</substituent>
      <substituent>Prostaglandin skeleton</substituent>
      <substituent>Secondary alcohol</substituent>
      <substituent>Unsaturated fatty acid</substituent>
    </substituents>
    <external_descriptors>
    </external_descriptors>
  </taxonomy>
  <state>Solid</state>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>4.27</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-4.02</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>3.37e-02 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>3.96</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>4.36</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-1.6</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>7-[(1R,4S,5R,6R)-6-[(3S)-3-hydroxyoct-1-en-1-yl]-2,3-dioxabicyclo[2.2.1]heptan-5-yl]hept-5-enoic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>352.4651</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>352.224974134</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>[H]C(=C[C@@]1([H])[C@@]2([H])C[C@]([H])(OO2)[C@]1([H])CC=CCCCC(O)=O)[C@@]([H])(O)CCCCC</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C20H32O5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C20H32O5/c1-2-3-6-9-15(21)12-13-17-16(18-14-19(17)25-24-18)10-7-4-5-8-11-20(22)23/h4,7,12-13,15-19,21H,2-3,5-6,8-11,14H2,1H3,(H,22,23)/t15-,16+,17+,18-,19+/m0/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>YIBNHAJFJUQSRA-BRIYLRKRSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>75.99</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>98.04</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>40.4</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>12</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>5</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>2</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
    <pathway>
      <name>Arachidonic Acid Metabolism</name>
      <smpdb_id>SMP00075</smpdb_id>
      <kegg_map_id>map00590</kegg_map_id>
    </pathway>
  </pathways>
  <spectra>
  </spectra>
  <hmdb_id>HMDB01381</hmdb_id>
  <pubchem_compound_id/>
  <chemspider_id/>
  <kegg_id/>
  <chebi_id/>
  <biocyc_id/>
  <het_id/>
  <wikipidia/>
  <vmh_id/>
  <fbonto_id/>
  <foodb_id/>
  <general_references>
    <reference>#&lt;Reference:0x000055ce31e6d9d0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6d7f0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6d458&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6d2a0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6d0e8&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6cf30&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6cd78&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6cbc0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6ca08&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6c850&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6c698&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6c4e0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6c1c0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6ebc8&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6f960&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6be00&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6bc20&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6ba68&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6b8b0&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6b6f8&gt;</reference>
    <reference>#&lt;Reference:0x000055ce31e6b540&gt;</reference>
  </general_references>
  <foods>
  </foods>
  <flavors>
  </flavors>
  <enzymes>
    <enzyme>
      <name>Hematopoietic prostaglandin D synthase</name>
      <uniprot_id>O60760</uniprot_id>
      <uniprot_name/>
      <gene_name>HPGDS</gene_name>
    </enzyme>
    <enzyme>
      <name>Prostaglandin E synthase</name>
      <uniprot_id>O14684</uniprot_id>
      <uniprot_name/>
      <gene_name>PTGES</gene_name>
    </enzyme>
    <enzyme>
      <name>Prostaglandin E synthase 2</name>
      <uniprot_id>Q9H7Z7</uniprot_id>
      <uniprot_name/>
      <gene_name>PTGES2</gene_name>
    </enzyme>
    <enzyme>
      <name>Prostaglandin E synthase 3</name>
      <uniprot_id>Q15185</uniprot_id>
      <uniprot_name/>
      <gene_name>PTGES3</gene_name>
    </enzyme>
    <enzyme>
      <name>Prostaglandin-H2 D-isomerase</name>
      <uniprot_id>P41222</uniprot_id>
      <uniprot_name/>
      <gene_name>PTGDS</gene_name>
    </enzyme>
  </enzymes>
  <health_effects>
  </health_effects>
</compound>
