Record Information
Version1.0
Creation date2011-09-21 01:45:03 UTC
Update date2019-11-26 03:21:29 UTC
Primary IDFDB028794
Secondary Accession NumbersNot Available
Chemical Information
FooDB Name(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate
Description(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate is a cyclic intermediate in lysine degradation. L-Lysine is an essential amino acid that is a necessary building block for all protein in the body and It plays a major role in calcium absorption; building muscle protein; recovering from surgery or sports injuries; and the body's production of hormones, enzymes, and antibodies. In lysine degradation pathway, (S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate is a substrate for L-aminoadipate-semialdehyde dehydrogenase (amaA) and can be formed by spontaneous cyclization of 2-aminoadipate-6-semialdehyde. [HMDB]. (S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate is found in many foods, some of which are sorghum, ginger, celery leaves, and lowbush blueberry.
CAS Number3038-89-9
Structure
Thumb
Synonyms
Predicted Properties
PropertyValueSource
Water Solubility8.53 g/LALOGPS
logP0.36ALOGPS
logP-1.8ChemAxon
logS-1.2ALOGPS
pKa (Strongest Acidic)2ChemAxon
pKa (Strongest Basic)6.22ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area49.66 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity32 m³·mol⁻¹ChemAxon
Polarizability12.7 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Chemical FormulaC6H9NO2
IUPAC name2,3,4,5-tetrahydropyridine-2-carboxylic acid
InChI IdentifierInChI=1S/C6H9NO2/c8-6(9)5-3-1-2-4-7-5/h4-5H,1-3H2,(H,8,9)
InChI KeyCSDPVAKVEWETFG-UHFFFAOYSA-N
Isomeric SMILESOC(=O)C1CCCC=N1
Average Molecular Weight127.1412
Monoisotopic Molecular Weight127.063328537
Classification
Description Belongs to the class of organic compounds known as alpha amino acids and derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon), or a derivative thereof.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acids and derivatives
Alternative Parents
Substituents
  • Alpha-amino acid or derivatives
  • Tetrahydropyridine
  • Hydropyridine
  • Azacycle
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Organic oxide
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Imine
  • Carbonyl group
  • Organic nitrogen compound
  • Organopnictogen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External Descriptors
Ontology
OntologyNo ontology term
Physico-Chemical Properties
Physico-Chemical Properties - Experimental
Spectra
Spectra
EI-MS/GC-MS
TypeDescriptionSplash KeyView
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-2900000000-69a4768f7423b3734587Spectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-1920000000-ed154476ed2afc3c6fafSpectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-2900000000-69a4768f7423b3734587Spectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-1920000000-ed154476ed2afc3c6fafSpectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-2900000000-69a4768f7423b3734587Spectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-1920000000-ed154476ed2afc3c6fafSpectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-2900000000-69a4768f7423b3734587Spectrum
GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, GC-MS Spectrumsplash10-0udi-1920000000-ed154476ed2afc3c6fafSpectrum
Predicted GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, non-derivatized, Predicted GC-MS Spectrum - 70eV, Positivesplash10-0f9x-9000000000-134bff92d6966f2def8dSpectrum
Predicted GC-MS(S)-2,3,4,5-Tetrahydropiperidine-2-carboxylate, 1 TMS, Predicted GC-MS Spectrum - 70eV, Positivesplash10-001i-9100000000-26047328d0a1182e46edSpectrum
MS/MS
TypeDescriptionSplash KeyView
MS/MSLC-MS/MS Spectrum - LC-ESI-QQ , negativesplash10-004i-0900000000-3008ef509a77fafa98b62017-09-14View Spectrum
MS/MSLC-MS/MS Spectrum - LC-ESI-QQ , positivesplash10-004i-2900000000-359c13aea0b555f15fdd2017-09-14View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-01t9-3900000000-7acf87e49673fc08eeaa2017-09-01View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-001i-9400000000-6ae0da8e10e93ebebb842017-09-01View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-0f8c-9000000000-14013ca57f11c19181672017-09-01View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-004i-2900000000-f6e66950933f111873a12017-09-01View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-003r-7900000000-c03c466dc61aeb1bfe712017-09-01View Spectrum
Predicted MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-001i-9000000000-1a556fe52ebd229273cb2017-09-01View Spectrum
NMRNot Available
ChemSpider ID144715
ChEMBL IDNot Available
KEGG Compound IDNot Available
Pubchem Compound ID165067
Pubchem Substance IDNot Available
ChEBI IDNot Available
Phenol-Explorer IDNot Available
DrugBank IDNot Available
HMDB IDHMDB12130
CRC / DFC (Dictionary of Food Compounds) IDNot Available
EAFUS IDNot Available
Dr. Duke IDNot Available
BIGG IDNot Available
KNApSAcK IDNot Available
HET IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
Flavornet IDNot Available
GoodScent IDNot Available
SuperScent IDNot Available
Wikipedia IDNot Available
Phenol-Explorer Metabolite IDNot Available
Duplicate IDSNot Available
Old DFC IDSNot Available
Associated Foods
FoodContent Range AverageReference
Processing...
Biological Effects and Interactions
Health Effects / BioactivitiesNot Available
EnzymesNot Available
PathwaysNot Available
MetabolismNot Available
BiosynthesisNot Available
Organoleptic Properties
FlavoursNot Available
Files
MSDSNot Available
References
Synthesis ReferenceNot Available
General ReferenceNot Available
Content Reference